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 Dr. José de Ondarza 
Research

My Home | Research Home | Research Team | G-protein Project | Fiber Hydrolysis Project | Paramecium

Fiber hydrolysis by soil microbes

Revised June 2004

Project overview

 

 

 References:

1. Beauchemin, K.A. and L.M. Rode, The potential use of feed enzymes for ruminants. Proceedings of the Cornell Nutrition Conference for feed manufacturers, 1996.

2. Hungate, R.E., The Rumen and its Microbes, Academic Press (New York), 1966.

3. Smibert, R.M., and N.R. Krieg, in Manual of Methods for General Bacteriology, American Society for Microbiology, 1981.

 

Research links: rice straw

Refs

  1. Carrine E. Blank, Sherry L. Cady, and Norman R. Pace

Microbial Composition of Near-Boiling Silica-Depositing Thermal Springs throughout Yellowstone National Park
Appl. Envir. Microbiol. 2002 68: 5123-5135.  [Abstract] [HTML] [PDF]

 

  1. Z Kerem and Y Hadar

Effect of manganese on preferential degradation of lignin by Pleurotus ostreatus during solid-state fermentation
Appl. Envir. Microbiol. 1995 61: 3057-3062.  [Abstract] [PDF]

 

  1. DE Akin, A Sethuraman, III Morrison WH, SA Martin, and KL Eriksson

Microbial Delignification with White Rot Fungi Improves Forage Digestibility
Appl. Envir. Microbiol. 1993 59: 4274-4282.  [Abstract]

 

  1. Sabine Weber, Stephan Stubner, and Ralf Conrad

Bacterial Populations Colonizing and Degrading Rice Straw in Anoxic Paddy Soil
Appl. Envir. Microbiol. 2001 67: 1318-1327.  [Abstract] [HTML] [PDF]

 

  1. W Reichardt, G Mascarina, B Padre, and J Doll

Microbial Communities of Continuously Cropped, Irrigated Rice Fields
Appl. Envir. Microbiol. 1997 63: 233-238.  [Abstract] [PDF]

 

  1. Kuk-Jeong Chin, Dittmar Hahn, Ulf Hengstmann, Werner Liesack, and Peter H. Janssen

Characterization and Identification of Numerically Abundant Culturable Bacteria from the Anoxic Bulk Soil of Rice Paddy Microcosms
Appl. Envir. Microbiol. 1999 65: 5042-5049.  [Abstract] [HTML] [PDF]

 

  1. Martin Hofrichter, Tamara Vares, Mika Kalsi, Sari Galkin, Katrin Scheibner, Wolfgang Fritsche, and Annele Hatakka

Production of Manganese Peroxidase and Organic Acids and Mineralization of 14C-Labelled Lignin (14C-DHP) during Solid-State Fermentation of Wheat Straw with the White Rot Fungus Nematoloma frowardii
Appl. Envir. Microbiol. 1999 65: 1864-1870.  [Abstract] [HTML] [PDF]

 

  1. T Vares, M Kalsi, and A Hatakka

Lignin Peroxidases, Manganese Peroxidases, and Other Ligninolytic Enzymes Produced by Phlebia radiata during Solid-State Fermentation of Wheat Straw
Appl. Envir. Microbiol. 1995 61: 3515-3520.  [Abstract] [PDF]

 

  1. Yi Jin Cai, Sandra J. Chapman, John A. Buswell, and Shu-ting Chang

Production and Distribution of Endoglucanase, Cellobiohydrolase, and beta -Glucosidase Components of the Cellulolytic System of Volvariella volvacea, the Edible Straw Mushroom
Appl. Envir. Microbiol. 1999 65: 553-559.  [Abstract] [HTML] [PDF]

 

  1. A Gutierrez, P Bocchini, GC Galletti, and AT Martinez

Analysis of Lignin-Polysaccharide Complexes Formed during Grass Lignin Degradation by Cultures of Pleurotus Species
Appl. Envir. Microbiol. 1996 62: 1928-1934.  [Abstract] [PDF]

 

  1. Mario C. N. Saparrat, Francisco Guillén, Angélica M. Arambarri, Angel T. Martínez, and María Jesús Martínez

Induction, Isolation, and Characterization of Two Laccases from the White Rot Basidiomycete Coriolopsis rigida
Appl. Envir. Microbiol. 2002 68: 1534-1540.  [Abstract] [HTML] [PDF]

 

  1. S Camarero, B Bockle, MJ Martinez, and AT Martinez

Manganese-Mediated Lignin Degradation by Pleurotus pulmonarius
Appl. Envir. Microbiol. 1996 62: 1070-1072.  [Abstract] [PDF]

 

  1. BR Vyas and HP Molitoris

Involvement of an extracellular H2O2-dependent ligninolytic activity of the white rot fungus Pleurotus ostreatus in the decolorization of Remazol brilliant blue R
Appl. Envir. Microbiol. 1995 61: 3919-3927.  [Abstract] [PDF]

 

  1. P Broda, PR Birch, PR Brooks, and PF Sims

PCR-mediated analysis of lignocellulolytic gene transcription by Phanerochaete chrysosporium: substrate-dependent differential expression within gene families
Appl. Envir. Microbiol. 1995 61: 2358-2364.  [Abstract] [PDF]

 

  1. Trevor M. D'Souza, Carlos S. Merritt, and C. Adinarayana Reddy

Lignin-Modifying Enzymes of the White Rot Basidiomycete Ganoderma lucidum
Appl. Envir. Microbiol. 1999 65: 5307-5313.  [Abstract] [HTML] [PDF]

 

  1. C. Raghukumar, T. M. D'Souza, R. G. Thorn, and C. A. Reddy

Lignin-Modifying Enzymes of Flavodon flavus, a Basidiomycete Isolated from a Coastal Marine Environment
Appl. Envir. Microbiol. 1999 65: 2103-2111.  [Abstract] [HTML] [PDF]

 

  1. Ian D. Reid and Michael G. Paice

Effects of Manganese Peroxidase on Residual Lignin of Softwood Kraft Pulp
Appl. Envir. Microbiol. 1998 64: 2273-2274.  [Abstract] [HTML] [PDF]

 

  1. Lucília Caramelo, María Jesús Martínez, and Ángel T. Martínez

A Search for Ligninolytic Peroxidases in the Fungus Pleurotus eryngii Involving alpha -Keto- gamma -Thiomethylbutyric Acid and Lignin Model Dimers
Appl. Envir. Microbiol. 1999 65: 916-922.  [Abstract] [HTML] [PDF]

 

  1. Philip Stewart and Daniel Cullen

Organization and Differential Regulation of a Cluster of Lignin Peroxidase Genes of Phanerochaete chrysosporium
J. Bacteriol. 1999 181: 3427-3432.  [Abstract] [HTML] [PDF]

 

  1. Patricia Ortiz-Bermúdez, Ewald Srebotnik, and Kenneth E. Hammel

Chlorination and Cleavage of Lignin Structures by Fungal Chloroperoxidases
Appl. Envir. Microbiol. 2003 69: 5015-5018.  [Abstract] [HTML] [PDF]

 

  1. Maarten D. Sollewijn Gelpke, Mary Mayfield-Gambill, Geoffrey P. Lin Cereghino, and Michael H. Gold

Homologous Expression of Recombinant Lignin Peroxidase in Phanerochaete chrysosporium
Appl. Envir. Microbiol. 1999 65: 1670-1674.  [Abstract] [HTML] [PDF]

 

  1. Mario C. N. Saparrat, Francisco Guillén, Angélica M. Arambarri, Angel T. Martínez, and María Jesús Martínez

Induction, Isolation, and Characterization of Two Laccases from the White Rot Basidiomycete Coriolopsis rigida
Appl. Envir. Microbiol. 2002 68: 1534-1540.  [Abstract] [HTML] [PDF]

 

  1. Patrick J. Collins, Margaret M. O'Brien, and Alan D. W. Dobson

Cloning and Characterization of a cDNA Encoding a Novel Extracellular Peroxidase from Trametes versicolor
Appl. Envir. Microbiol. 1999 65: 1343-1347.  [Abstract] [HTML] [PDF]

 

  1. Xue Peng, Takashi Egashira, Kaoru Hanashiro, Eiji Masai, Seiji Nishikawa, Yoshihiro Katayama, Kazuhide Kimbara, and Masao Fukuda

Cloning of a Sphingomonas paucimobilis SYK-6 Gene Encoding a Novel Oxygenase That Cleaves Lignin-Related Biphenyl and Characterization of the Enzyme
Appl. Envir. Microbiol. 1998 64: 2520-2527.  [Abstract] [HTML] [PDF]

 

  1. CS McSweeney, A Dulieu, Y Katayama, and JB Lowry

Solubilization of lignin by the ruminal anaerobic fungus Neocallimastix patriciarum
Appl. Envir. Microbiol. 1994 60: 2985-2989.  [Abstract]

 

 

 

 

 

 

This page was last edited on 08/19/04 .

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